Protein–RNA interactions for Protein: Q9NYG2

ZDHHC3, Palmitoyltransferase ZDHHC3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3Q9NYG2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 KRT18P29-201ENST00000397031 1267 ntBASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 AC239809.2-201ENST00000415381 517 ntBASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZDHHC3Q9NYG2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 KRASP1-201ENST00000407852 552 ntBASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZDHHC3Q9NYG2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZDHHC3Q9NYG2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.39■□□□□ 0.7
ZDHHC3Q9NYG2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZDHHC3Q9NYG2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 ABHD17AP1-201ENST00000358206 933 ntBASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 KRT18P16-201ENST00000510337 1294 ntBASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZDHHC3Q9NYG2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 AC133681.1-201ENST00000465482 601 ntBASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
ZDHHC3Q9NYG2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms