Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 RARRES2P10-201ENST00000564312 460 ntBASIC18.19■□□□□ 0.5
HPF1Q9NWY4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 AC116351.2-201ENST00000606540 1585 ntBASIC18.19■□□□□ 0.5
HPF1Q9NWY4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 PHGDH-210ENST00000641115 1638 ntBASIC18.19■□□□□ 0.5
HPF1Q9NWY4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPF1Q9NWY4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 RPS2P55-201ENST00000397318 883 ntBASIC18.18■□□□□ 0.5
HPF1Q9NWY4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 AL596275.1-201ENST00000423464 877 ntBASIC18.18■□□□□ 0.5
HPF1Q9NWY4 AC107956.1-201ENST00000494359 873 ntBASIC18.18■□□□□ 0.5
HPF1Q9NWY4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 AP006587.1-201ENST00000534129 1502 ntBASIC18.18■□□□□ 0.5
HPF1Q9NWY4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPF1Q9NWY4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 AP005212.1-201ENST00000581547 1997 ntBASIC18.17■□□□□ 0.5
HPF1Q9NWY4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 AC233702.5-201ENST00000584107 538 ntBASIC18.17■□□□□ 0.5
HPF1Q9NWY4 AC018553.1-201ENST00000616682 1458 ntBASIC18.17■□□□□ 0.5
HPF1Q9NWY4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPF1Q9NWY4 BX119927.1-201ENST00000636596 1552 ntBASIC18.17■□□□□ 0.5
HPF1Q9NWY4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 FEM1AP1-201ENST00000431297 1995 ntBASIC18.16■□□□□ 0.5
HPF1Q9NWY4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 HTR7P1-201ENST00000538670 1336 ntBASIC18.16■□□□□ 0.5
HPF1Q9NWY4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HPF1Q9NWY4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPF1Q9NWY4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HPF1Q9NWY4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPF1Q9NWY4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPF1Q9NWY4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPF1Q9NWY4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HPF1Q9NWY4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms