Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
ECHDC1Q9NTX5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 C1QBPP2-201ENST00000528754 825 ntBASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ECHDC1Q9NTX5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 RPPH1-201ENST00000516869 333 ntBASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ECHDC1Q9NTX5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
ECHDC1Q9NTX5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.92■■□□□ 1.42
ECHDC1Q9NTX5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 TUBB8P6-201ENST00000436895 1288 ntBASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 AC098590.1-201ENST00000468126 897 ntBASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 AC110285.5-201ENST00000611501 352 ntBASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 AL359736.2-201ENST00000621992 437 ntBASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
ECHDC1Q9NTX5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms