Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC133681.1-201ENST00000465482 601 ntBASIC20.56■□□□□ 0.88
CD248Q9HCU0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD248Q9HCU0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CD248Q9HCU0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CD248Q9HCU0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CD248Q9HCU0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CD248Q9HCU0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.55■□□□□ 0.88
CD248Q9HCU0 AC124016.1-201ENST00000609552 612 ntBASIC20.55■□□□□ 0.88
CD248Q9HCU0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.55■□□□□ 0.88
CD248Q9HCU0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.55■□□□□ 0.88
CD248Q9HCU0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CD248Q9HCU0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CD248Q9HCU0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD248Q9HCU0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD248Q9HCU0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.54■□□□□ 0.88
CD248Q9HCU0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD248Q9HCU0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.53■□□□□ 0.88
CD248Q9HCU0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CD248Q9HCU0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.52■□□□□ 0.88
CD248Q9HCU0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CD248Q9HCU0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CD248Q9HCU0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms