Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIPK3Q9H422 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.53■■□□□ 1.04
HIPK3Q9H422 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.52■■□□□ 1.04
HIPK3Q9H422 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.52■■□□□ 1.04
HIPK3Q9H422 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.52■■□□□ 1.04
HIPK3Q9H422 KRT18P48-201ENST00000434763 852 ntBASIC21.52■■□□□ 1.04
HIPK3Q9H422 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.52■■□□□ 1.04
HIPK3Q9H422 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 AC011558.1-201ENST00000623459 338 ntBASIC21.52■■□□□ 1.04
HIPK3Q9H422 AL121956.5-201ENST00000625261 221 ntBASIC21.52■■□□□ 1.04
HIPK3Q9H422 AC092338.2-201ENST00000568827 1415 ntBASIC21.52■■□□□ 1.04
HIPK3Q9H422 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK3Q9H422 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
HIPK3Q9H422 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HIPK3Q9H422 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
HIPK3Q9H422 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
HIPK3Q9H422 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HIPK3Q9H422 EP400NL-214ENST00000641289 2402 ntBASIC21.51■■□□□ 1.03
HIPK3Q9H422 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIPK3Q9H422 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIPK3Q9H422 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIPK3Q9H422 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.51■■□□□ 1.03
HIPK3Q9H422 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 TPM4P1-201ENST00000436100 807 ntBASIC21.51■■□□□ 1.03
HIPK3Q9H422 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 FAM86EP-206ENST00000510506 987 ntBASIC21.51■■□□□ 1.03
HIPK3Q9H422 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.51■■□□□ 1.03
HIPK3Q9H422 PHGDH-210ENST00000641115 1638 ntBASIC21.51■■□□□ 1.03
HIPK3Q9H422 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HIPK3Q9H422 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIPK3Q9H422 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIPK3Q9H422 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIPK3Q9H422 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
HIPK3Q9H422 IER3-202ENST00000376377 1350 ntBASIC21.49■■□□□ 1.03
HIPK3Q9H422 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK3Q9H422 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK3Q9H422 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK3Q9H422 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK3Q9H422 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.49■■□□□ 1.03
HIPK3Q9H422 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK3Q9H422 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.49■■□□□ 1.03
HIPK3Q9H422 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HIPK3Q9H422 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK3Q9H422 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HIPK3Q9H422 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.49■■□□□ 1.03
HIPK3Q9H422 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK3Q9H422 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK3Q9H422 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK3Q9H422 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HIPK3Q9H422 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK3Q9H422 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK3Q9H422 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK3Q9H422 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK3Q9H422 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 TSPY17P-201ENST00000450329 467 ntBASIC21.48■■□□□ 1.03
HIPK3Q9H422 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 AL023803.3-201ENST00000615559 522 ntBASIC21.48■■□□□ 1.03
HIPK3Q9H422 AC093458.2-201ENST00000623150 629 ntBASIC21.48■■□□□ 1.03
HIPK3Q9H422 AL031432.5-201ENST00000641059 760 ntBASIC21.48■■□□□ 1.03
HIPK3Q9H422 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.48■■□□□ 1.03
HIPK3Q9H422 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK3Q9H422 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK3Q9H422 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms