Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 AP000525.1-201ENST00000608286 694 ntBASIC20.63■□□□□ 0.89
ATXN3LQ9H3M9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN3LQ9H3M9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN3LQ9H3M9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN3LQ9H3M9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN3LQ9H3M9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN3LQ9H3M9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN3LQ9H3M9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 AC010331.1-201ENST00000611423 582 ntBASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 SMG8-203ENST00000578922 2178 ntBASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 AL391422.3-201ENST00000603791 2761 ntBASIC20.62■□□□□ 0.89
ATXN3LQ9H3M9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 AC020907.5-201ENST00000624372 1936 ntBASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 MIR1238-201ENST00000408483 83 ntBASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.61■□□□□ 0.89
ATXN3LQ9H3M9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 AC073130.3-201ENST00000624389 2278 ntBASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 C1QL1P1-201ENST00000568105 661 ntBASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 LINC01521-201ENST00000504184 1943 ntBASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.6■□□□□ 0.89
ATXN3LQ9H3M9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 GABARAPL3-202ENST00000624044 1851 ntBASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 RCN1P1-201ENST00000400413 996 ntBASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 YBX1P10-201ENST00000444752 975 ntBASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 AC116562.2-201ENST00000507042 360 ntBASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 MIR6786-201ENST00000616843 113 ntBASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 PHGDH-210ENST00000641115 1638 ntBASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN3LQ9H3M9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms