Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 AC091874.3-201ENST00000512672 1195 ntBASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 AC098934.4-201ENST00000564127 592 ntBASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
UPF3BQ9BZI7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 AL032819.2-201ENST00000624543 2162 ntBASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 AC006557.6-201ENST00000623071 864 ntBASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.37■■□□□ 1.33
UPF3BQ9BZI7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 AC005829.2-201ENST00000571422 1056 ntBASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
UPF3BQ9BZI7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 SLC29A4P1-201ENST00000398760 971 ntBASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.35■■□□□ 1.33
UPF3BQ9BZI7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 AL138781.1-201ENST00000566567 1274 ntBASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPF3BQ9BZI7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.33■■□□□ 1.33
UPF3BQ9BZI7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms