Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
UPK3BQ9BT76 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 DPP3P2-201ENST00000416030 1696 ntBASIC13.64□□□□□ -0.23
UPK3BQ9BT76 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 KRT16P6-202ENST00000425692 1426 ntBASIC13.64□□□□□ -0.23
UPK3BQ9BT76 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK3BQ9BT76 AL135905.2-201ENST00000584934 1404 ntBASIC13.64□□□□□ -0.23
UPK3BQ9BT76 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 KRASP1-201ENST00000407852 552 ntBASIC13.63□□□□□ -0.23
UPK3BQ9BT76 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 RPS2P4-201ENST00000476944 856 ntBASIC13.63□□□□□ -0.23
UPK3BQ9BT76 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK3BQ9BT76 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 AC012618.2-201ENST00000428058 849 ntBASIC13.62□□□□□ -0.23
UPK3BQ9BT76 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms