Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 AP001271.2-201ENST00000624018 1556 ntBASIC16.82■□□□□ 0.28
NICN1Q9BSH3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 KRT8P20-201ENST00000423953 1409 ntBASIC16.82■□□□□ 0.28
NICN1Q9BSH3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 AL162412.1-201ENST00000567129 965 ntBASIC16.82■□□□□ 0.28
NICN1Q9BSH3 AC013268.1-206ENST00000638368 961 ntBASIC16.82■□□□□ 0.28
NICN1Q9BSH3 AC112229.1-201ENST00000639295 961 ntBASIC16.82■□□□□ 0.28
NICN1Q9BSH3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NICN1Q9BSH3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 AC007322.4-201ENST00000509611 723 ntBASIC16.81■□□□□ 0.28
NICN1Q9BSH3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NICN1Q9BSH3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 MCRIP2P1-201ENST00000394346 511 ntBASIC16.8■□□□□ 0.28
NICN1Q9BSH3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 NTF6G-201ENST00000591094 616 ntBASIC16.8■□□□□ 0.28
NICN1Q9BSH3 AC105020.6-201ENST00000621523 1217 ntBASIC16.8■□□□□ 0.28
NICN1Q9BSH3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NICN1Q9BSH3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 AC020763.4-201ENST00000623414 4170 ntBASIC16.79■□□□□ 0.28
NICN1Q9BSH3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NICN1Q9BSH3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms