Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VRK1Q99986 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK1Q99986 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.28■□□□□ 0.36
VRK1Q99986 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
VRK1Q99986 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
VRK1Q99986 HCG11-201ENST00000411553 5696 ntBASIC17.27■□□□□ 0.36
VRK1Q99986 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.27■□□□□ 0.36
VRK1Q99986 AC121338.2-201ENST00000622535 1744 ntBASIC17.27■□□□□ 0.36
VRK1Q99986 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.27■□□□□ 0.36
VRK1Q99986 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
VRK1Q99986 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
VRK1Q99986 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 AL390719.1-204ENST00000412397 1219 ntBASIC17.27■□□□□ 0.36
VRK1Q99986 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK1Q99986 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.27■□□□□ 0.36
VRK1Q99986 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
VRK1Q99986 FAM197Y4-202ENST00000622692 608 ntBASIC17.27■□□□□ 0.36
VRK1Q99986 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK1Q99986 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK1Q99986 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.27■□□□□ 0.35
VRK1Q99986 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VRK1Q99986 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK1Q99986 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK1Q99986 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK1Q99986 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK1Q99986 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK1Q99986 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.27■□□□□ 0.35
VRK1Q99986 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK1Q99986 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 PLK5-205ENST00000642079 1969 ntBASIC17.26■□□□□ 0.35
VRK1Q99986 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 AC027702.1-201ENST00000563810 1770 ntBASIC17.26■□□□□ 0.35
VRK1Q99986 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.26■□□□□ 0.35
VRK1Q99986 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.26■□□□□ 0.35
VRK1Q99986 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.26■□□□□ 0.35
VRK1Q99986 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.26■□□□□ 0.35
VRK1Q99986 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.26■□□□□ 0.35
VRK1Q99986 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.26■□□□□ 0.35
VRK1Q99986 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VRK1Q99986 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.26■□□□□ 0.35
VRK1Q99986 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.26■□□□□ 0.35
VRK1Q99986 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VRK1Q99986 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK1Q99986 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK1Q99986 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 AC020907.5-201ENST00000624372 1936 ntBASIC17.25■□□□□ 0.35
VRK1Q99986 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK1Q99986 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK1Q99986 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK1Q99986 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK1Q99986 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK1Q99986 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
VRK1Q99986 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK1Q99986 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VRK1Q99986 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK1Q99986 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK1Q99986 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.25■□□□□ 0.35
VRK1Q99986 C1QBPP2-201ENST00000528754 825 ntBASIC17.25■□□□□ 0.35
VRK1Q99986 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
VRK1Q99986 AC006557.6-201ENST00000623071 864 ntBASIC17.25■□□□□ 0.35
VRK1Q99986 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VRK1Q99986 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
VRK1Q99986 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK1Q99986 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VRK1Q99986 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms