Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TIMP4Q99727 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TIMP4Q99727 BX323043.1-201ENST00000641006 1765 ntBASIC18.02■□□□□ 0.47
TIMP4Q99727 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP4Q99727 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP4Q99727 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP4Q99727 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP4Q99727 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TIMP4Q99727 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.01■□□□□ 0.47
TIMP4Q99727 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.01■□□□□ 0.47
TIMP4Q99727 AC239809.2-201ENST00000415381 517 ntBASIC18.01■□□□□ 0.47
TIMP4Q99727 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.01■□□□□ 0.47
TIMP4Q99727 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.01■□□□□ 0.47
TIMP4Q99727 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.01■□□□□ 0.47
TIMP4Q99727 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.01■□□□□ 0.47
TIMP4Q99727 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP4Q99727 AL691432.2-201ENST00000607222 2038 ntBASIC18.01■□□□□ 0.47
TIMP4Q99727 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TIMP4Q99727 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TIMP4Q99727 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TIMP4Q99727 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18■□□□□ 0.47
TIMP4Q99727 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TIMP4Q99727 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18■□□□□ 0.47
TIMP4Q99727 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
TIMP4Q99727 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18■□□□□ 0.47
TIMP4Q99727 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18■□□□□ 0.47
TIMP4Q99727 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
TIMP4Q99727 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18■□□□□ 0.47
TIMP4Q99727 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TIMP4Q99727 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TIMP4Q99727 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18■□□□□ 0.47
TIMP4Q99727 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18■□□□□ 0.47
TIMP4Q99727 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP4Q99727 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TIMP4Q99727 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 KRT8P20-201ENST00000423953 1409 ntBASIC17.99■□□□□ 0.47
TIMP4Q99727 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMP4Q99727 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 KRASP1-201ENST00000407852 552 ntBASIC17.99■□□□□ 0.47
TIMP4Q99727 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TIMP4Q99727 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 PRKY-204ENST00000533551 1019 ntBASIC17.99■□□□□ 0.47
TIMP4Q99727 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMP4Q99727 AC110285.5-201ENST00000611501 352 ntBASIC17.99■□□□□ 0.47
TIMP4Q99727 AL121829.2-201ENST00000620908 328 ntBASIC17.99■□□□□ 0.47
TIMP4Q99727 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TIMP4Q99727 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TIMP4Q99727 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP4Q99727 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.99■□□□□ 0.47
TIMP4Q99727 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP4Q99727 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.98■□□□□ 0.47
TIMP4Q99727 AC124283.5-201ENST00000624661 1809 ntBASIC17.98■□□□□ 0.47
TIMP4Q99727 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TIMP4Q99727 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 MIR718-201ENST00000390190 70 ntBASIC17.98■□□□□ 0.47
TIMP4Q99727 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP4Q99727 AL596275.1-201ENST00000423464 877 ntBASIC17.98■□□□□ 0.47
TIMP4Q99727 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP4Q99727 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.98■□□□□ 0.47
TIMP4Q99727 AL031963.3-201ENST00000606441 850 ntBASIC17.98■□□□□ 0.47
TIMP4Q99727 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP4Q99727 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP4Q99727 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TIMP4Q99727 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP4Q99727 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TIMP4Q99727 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.98■□□□□ 0.47
TIMP4Q99727 KRT8P17-201ENST00000453110 1448 ntBASIC17.98■□□□□ 0.47
TIMP4Q99727 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP4Q99727 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms