Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
PKP4Q99569 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.12■□□□□ 0.65
PKP4Q99569 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PKP4Q99569 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.11■□□□□ 0.65
PKP4Q99569 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.11■□□□□ 0.65
PKP4Q99569 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PKP4Q99569 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PKP4Q99569 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 TSPY20P-201ENST00000450910 630 ntBASIC19.11■□□□□ 0.65
PKP4Q99569 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.11■□□□□ 0.65
PKP4Q99569 MTDHP1-201ENST00000605323 784 ntBASIC19.11■□□□□ 0.65
PKP4Q99569 AC006058.3-201ENST00000606217 1069 ntBASIC19.11■□□□□ 0.65
PKP4Q99569 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.11■□□□□ 0.65
PKP4Q99569 TREX1-205ENST00000625293 1783 ntBASIC19.11■□□□□ 0.65
PKP4Q99569 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.11■□□□□ 0.65
PKP4Q99569 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP4Q99569 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.1■□□□□ 0.65
PKP4Q99569 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 AP006587.1-201ENST00000534129 1502 ntBASIC19.1■□□□□ 0.65
PKP4Q99569 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PKP4Q99569 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.1■□□□□ 0.65
PKP4Q99569 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.1■□□□□ 0.65
PKP4Q99569 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
PKP4Q99569 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.1■□□□□ 0.65
PKP4Q99569 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.1■□□□□ 0.65
PKP4Q99569 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.1■□□□□ 0.65
PKP4Q99569 AC073648.6-201ENST00000641589 218 ntBASIC19.1■□□□□ 0.65
PKP4Q99569 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PKP4Q99569 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP4Q99569 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP4Q99569 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.09■□□□□ 0.65
PKP4Q99569 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKP4Q99569 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.09■□□□□ 0.65
PKP4Q99569 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PKP4Q99569 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.09■□□□□ 0.65
PKP4Q99569 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PKP4Q99569 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PKP4Q99569 AC128676.1-201ENST00000454392 318 ntBASIC19.09■□□□□ 0.65
PKP4Q99569 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.09■□□□□ 0.65
PKP4Q99569 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP4Q99569 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP4Q99569 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKP4Q99569 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PKP4Q99569 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PKP4Q99569 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKP4Q99569 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PKP4Q99569 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PKP4Q99569 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.09■□□□□ 0.65
PKP4Q99569 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.08■□□□□ 0.65
PKP4Q99569 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PKP4Q99569 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PKP4Q99569 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PKP4Q99569 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.08■□□□□ 0.65
PKP4Q99569 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PKP4Q99569 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PKP4Q99569 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PKP4Q99569 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.08■□□□□ 0.65
PKP4Q99569 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKP4Q99569 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKP4Q99569 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PKP4Q99569 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.08■□□□□ 0.64
PKP4Q99569 FAM201B-201ENST00000458407 597 ntBASIC19.08■□□□□ 0.64
PKP4Q99569 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.08■□□□□ 0.64
PKP4Q99569 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.08■□□□□ 0.64
PKP4Q99569 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms