Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 AC026271.3-201ENST00000571884 352 ntBASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK5RAP1Q96SZ6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 CR392000.1-201ENST00000624770 1228 ntBASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDK5RAP1Q96SZ6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 NUDT16P1-203ENST00000513809 620 ntBASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 AP003071.4-201ENST00000562276 1284 ntBASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 AL031985.4-201ENST00000642138 673 ntBASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK5RAP1Q96SZ6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 AC131212.4-201ENST00000623606 975 ntBASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK5RAP1Q96SZ6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 TCF3P1-201ENST00000423021 1937 ntBASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.34■□□□□ 0.85
CDK5RAP1Q96SZ6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms