Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 AC026366.1-201ENST00000488803 879 ntBASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 AP006587.1-201ENST00000534129 1502 ntBASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 AC093484.2-201ENST00000580996 2166 ntBASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.25■□□□□ 0.83
CSPG4P5Q96PW8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG4P5Q96PW8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.23■□□□□ 0.83
CSPG4P5Q96PW8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 YBX1P10-201ENST00000444752 975 ntBASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG4P5Q96PW8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 AC007952.6-201ENST00000573168 2673 ntBASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 AC003957.1-201ENST00000625108 2673 ntBASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms