Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 C1QL1P1-201ENST00000568105 661 ntBASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 AC006011.2-201ENST00000621313 1158 ntBASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 FEM1AP1-201ENST00000431297 1995 ntBASIC18.79■□□□□ 0.6
SLC46A1Q96NT5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 ECEL1P2-202ENST00000465689 757 ntBASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 DGCR10-201ENST00000609839 495 ntBASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 AP006587.1-201ENST00000534129 1502 ntBASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 AC020907.5-201ENST00000624372 1936 ntBASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC46A1Q96NT5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 KRT8P17-201ENST00000453110 1448 ntBASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 AC128688.1-201ENST00000487626 519 ntBASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC46A1Q96NT5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLC46A1Q96NT5 AP005212.1-201ENST00000581547 1997 ntBASIC18.77■□□□□ 0.59
SLC46A1Q96NT5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.77■□□□□ 0.59
SLC46A1Q96NT5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLC46A1Q96NT5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 B3GAT3P1-201ENST00000471720 806 ntBASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 AC073314.1-201ENST00000568729 2216 ntBASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC46A1Q96NT5 GABARAPL3-202ENST00000624044 1851 ntBASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC46A1Q96NT5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms