Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF48Q96MX3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 CR392000.1-201ENST00000624770 1228 ntBASIC15.97■□□□□ 0.15
ZNF48Q96MX3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.97■□□□□ 0.15
ZNF48Q96MX3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 MIR6786-201ENST00000616843 113 ntBASIC15.96■□□□□ 0.15
ZNF48Q96MX3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF48Q96MX3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.96■□□□□ 0.14
ZNF48Q96MX3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ZNF48Q96MX3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
ZNF48Q96MX3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ZNF48Q96MX3 DPP3P2-201ENST00000416030 1696 ntBASIC15.95■□□□□ 0.14
ZNF48Q96MX3 AL162377.1-201ENST00000618844 1793 ntBASIC15.95■□□□□ 0.14
ZNF48Q96MX3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 UNC93B2-201ENST00000285383 730 ntBASIC15.95■□□□□ 0.14
ZNF48Q96MX3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 NIFKP9-201ENST00000419265 221 ntBASIC15.95■□□□□ 0.14
ZNF48Q96MX3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 RN7SL850P-201ENST00000579959 291 ntBASIC15.95■□□□□ 0.14
ZNF48Q96MX3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.95■□□□□ 0.14
ZNF48Q96MX3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
ZNF48Q96MX3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms