Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
DDX11Q96FC9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
DDX11Q96FC9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
DDX11Q96FC9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.28■■□□□ 1.32
DDX11Q96FC9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.28■■□□□ 1.32
DDX11Q96FC9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 MTDHP1-201ENST00000605323 784 ntBASIC23.28■■□□□ 1.32
DDX11Q96FC9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
DDX11Q96FC9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX11Q96FC9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX11Q96FC9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX11Q96FC9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.27■■□□□ 1.32
DDX11Q96FC9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX11Q96FC9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX11Q96FC9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
DDX11Q96FC9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX11Q96FC9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX11Q96FC9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX11Q96FC9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX11Q96FC9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX11Q96FC9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX11Q96FC9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.27■■□□□ 1.32
DDX11Q96FC9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.27■■□□□ 1.32
DDX11Q96FC9 AL023875.1-201ENST00000640777 796 ntBASIC23.27■■□□□ 1.32
DDX11Q96FC9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.27■■□□□ 1.32
DDX11Q96FC9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX11Q96FC9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
DDX11Q96FC9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 SNORA78-201ENST00000459373 127 ntBASIC23.26■■□□□ 1.31
DDX11Q96FC9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 AL031963.3-201ENST00000606441 850 ntBASIC23.26■■□□□ 1.31
DDX11Q96FC9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX11Q96FC9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX11Q96FC9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX11Q96FC9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX11Q96FC9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX11Q96FC9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX11Q96FC9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX11Q96FC9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
DDX11Q96FC9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX11Q96FC9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX11Q96FC9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX11Q96FC9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX11Q96FC9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX11Q96FC9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX11Q96FC9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX11Q96FC9 AC007952.6-201ENST00000573168 2673 ntBASIC23.25■■□□□ 1.31
DDX11Q96FC9 AC003957.1-201ENST00000625108 2673 ntBASIC23.25■■□□□ 1.31
DDX11Q96FC9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX11Q96FC9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
DDX11Q96FC9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
DDX11Q96FC9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX11Q96FC9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX11Q96FC9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX11Q96FC9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.24■■□□□ 1.31
DDX11Q96FC9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX11Q96FC9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX11Q96FC9 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.24■■□□□ 1.31
DDX11Q96FC9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX11Q96FC9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DDX11Q96FC9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX11Q96FC9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
DDX11Q96FC9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX11Q96FC9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX11Q96FC9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX11Q96FC9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DDX11Q96FC9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms