Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PGBD4Q96DM1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.28■■□□□ 1
PGBD4Q96DM1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PGBD4Q96DM1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.28■■□□□ 1
PGBD4Q96DM1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PGBD4Q96DM1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PGBD4Q96DM1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PGBD4Q96DM1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.28■■□□□ 1
PGBD4Q96DM1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.28■■□□□ 1
PGBD4Q96DM1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.28■■□□□ 1
PGBD4Q96DM1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.28■■□□□ 1
PGBD4Q96DM1 AC145285.6-201ENST00000604632 637 ntBASIC21.28■■□□□ 1
PGBD4Q96DM1 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.28■■□□□ 1
PGBD4Q96DM1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.28■■□□□ 1
PGBD4Q96DM1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PGBD4Q96DM1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.28■■□□□ 1
PGBD4Q96DM1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.28■■□□□ 1
PGBD4Q96DM1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.27■■□□□ 1
PGBD4Q96DM1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD4Q96DM1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD4Q96DM1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD4Q96DM1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD4Q96DM1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD4Q96DM1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
PGBD4Q96DM1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.27■■□□□ 1
PGBD4Q96DM1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD4Q96DM1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.27■■□□□ 1
PGBD4Q96DM1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.27■■□□□ 1
PGBD4Q96DM1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.27■■□□□ 1
PGBD4Q96DM1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.27■■□□□ 1
PGBD4Q96DM1 NAPSB-206ENST00000562112 1266 ntBASIC21.27■■□□□ 1
PGBD4Q96DM1 MIR6786-201ENST00000616843 113 ntBASIC21.27■■□□□ 1
PGBD4Q96DM1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD4Q96DM1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.27■■□□□ 1
PGBD4Q96DM1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD4Q96DM1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
PGBD4Q96DM1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
PGBD4Q96DM1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PGBD4Q96DM1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.26■□□□□ 0.99
PGBD4Q96DM1 AC020907.5-201ENST00000624372 1936 ntBASIC21.25■□□□□ 0.99
PGBD4Q96DM1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 AC004980.1-204ENST00000429707 299 ntBASIC21.25■□□□□ 0.99
PGBD4Q96DM1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 KRT8P9-201ENST00000558927 1449 ntBASIC21.25■□□□□ 0.99
PGBD4Q96DM1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 DGCR10-201ENST00000609839 495 ntBASIC21.25■□□□□ 0.99
PGBD4Q96DM1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.25■□□□□ 0.99
PGBD4Q96DM1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.25■□□□□ 0.99
PGBD4Q96DM1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 LINC01568-207ENST00000641790 1380 ntBASIC21.24■□□□□ 0.99
PGBD4Q96DM1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 RCN1P1-201ENST00000400413 996 ntBASIC21.24■□□□□ 0.99
PGBD4Q96DM1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 AL390955.1-201ENST00000428694 934 ntBASIC21.24■□□□□ 0.99
PGBD4Q96DM1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 TMEM179-206ENST00000616017 1645 ntBASIC21.24■□□□□ 0.99
PGBD4Q96DM1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.24■□□□□ 0.99
PGBD4Q96DM1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
PGBD4Q96DM1 AP001271.2-201ENST00000624018 1556 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms