Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3S1Q92572 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
AP3S1Q92572 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP3S1Q92572 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3S1Q92572 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3S1Q92572 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3S1Q92572 BX842568.3-201ENST00000418104 571 ntBASIC17.29■□□□□ 0.36
AP3S1Q92572 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3S1Q92572 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3S1Q92572 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3S1Q92572 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3S1Q92572 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3S1Q92572 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3S1Q92572 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S1Q92572 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3S1Q92572 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3S1Q92572 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S1Q92572 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.28■□□□□ 0.36
AP3S1Q92572 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP3S1Q92572 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 IGHV3-19-201ENST00000521488 291 ntBASIC17.28■□□□□ 0.36
AP3S1Q92572 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S1Q92572 AC105233.4-201ENST00000642045 216 ntBASIC17.28■□□□□ 0.36
AP3S1Q92572 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3S1Q92572 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP3S1Q92572 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP3S1Q92572 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3S1Q92572 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S1Q92572 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
AP3S1Q92572 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S1Q92572 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3S1Q92572 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP3S1Q92572 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3S1Q92572 AP001271.2-201ENST00000624018 1556 ntBASIC17.28■□□□□ 0.36
AP3S1Q92572 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP3S1Q92572 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.27■□□□□ 0.36
AP3S1Q92572 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.27■□□□□ 0.36
AP3S1Q92572 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
AP3S1Q92572 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
AP3S1Q92572 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.27■□□□□ 0.36
AP3S1Q92572 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
AP3S1Q92572 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S1Q92572 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S1Q92572 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S1Q92572 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.27■□□□□ 0.36
AP3S1Q92572 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
AP3S1Q92572 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
AP3S1Q92572 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
AP3S1Q92572 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S1Q92572 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S1Q92572 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S1Q92572 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S1Q92572 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S1Q92572 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S1Q92572 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S1Q92572 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S1Q92572 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms