Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3RF2Q8TEC5 SLC25A24-204ENST00000569674 2357 ntBASIC20.39■□□□□ 0.86
SH3RF2Q8TEC5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.39■□□□□ 0.86
SH3RF2Q8TEC5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SH3RF2Q8TEC5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SH3RF2Q8TEC5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SH3RF2Q8TEC5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.39■□□□□ 0.86
SH3RF2Q8TEC5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SH3RF2Q8TEC5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SH3RF2Q8TEC5 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.39■□□□□ 0.86
SH3RF2Q8TEC5 AL391422.3-201ENST00000603791 2761 ntBASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 TUBB8P6-201ENST00000436895 1288 ntBASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
SH3RF2Q8TEC5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 KRT8P9-201ENST00000558927 1449 ntBASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 MIR1224-201ENST00000408193 85 ntBASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 MIR1238-201ENST00000408483 83 ntBASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF2Q8TEC5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 AL445675.2-201ENST00000620291 557 ntBASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 AL031985.4-201ENST00000642138 673 ntBASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SH3RF2Q8TEC5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 BX119927.1-201ENST00000636596 1552 ntBASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.36■□□□□ 0.85
SH3RF2Q8TEC5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3RF2Q8TEC5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms