Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 RPS2P52-201ENST00000469610 820 ntBASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 AC066615.1-201ENST00000640911 628 ntBASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 UNC93B4-201ENST00000505679 747 ntBASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.47■□□□□ 0.55
SIMC1Q8NDZ2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 AC018553.1-201ENST00000616682 1458 ntBASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 TMEM179-206ENST00000616017 1645 ntBASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 BX323043.1-201ENST00000641006 1765 ntBASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 AC120498.8-201ENST00000614275 531 ntBASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIMC1Q8NDZ2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SIMC1Q8NDZ2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SIMC1Q8NDZ2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 AC008687.6-201ENST00000596318 630 ntBASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms