Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 PHGDH-210ENST00000641115 1638 ntBASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 AC073210.2-201ENST00000430369 194 ntBASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 MIR4758-201ENST00000577688 71 ntBASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 MYC-209ENST00000641252 345 ntBASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF439Q8NDP4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 TREX1-205ENST00000625293 1783 ntBASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF439Q8NDP4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF439Q8NDP4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms