Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 PTBP1P-201ENST00000554374 1601 ntBASIC19.16■□□□□ 0.66
CPSF7Q8N684 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 CDV3P1-201ENST00000471403 739 ntBASIC19.16■□□□□ 0.66
CPSF7Q8N684 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPSF7Q8N684 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.15■□□□□ 0.66
CPSF7Q8N684 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPSF7Q8N684 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPSF7Q8N684 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPSF7Q8N684 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPSF7Q8N684 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPSF7Q8N684 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPSF7Q8N684 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPSF7Q8N684 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPSF7Q8N684 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPSF7Q8N684 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPSF7Q8N684 NEFHP1-201ENST00000412845 2629 ntBASIC19.14■□□□□ 0.65
CPSF7Q8N684 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPSF7Q8N684 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.14■□□□□ 0.65
CPSF7Q8N684 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPSF7Q8N684 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 AC008694.1-202ENST00000636953 945 ntBASIC19.13■□□□□ 0.65
CPSF7Q8N684 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 KRT8P17-201ENST00000453110 1448 ntBASIC19.13■□□□□ 0.65
CPSF7Q8N684 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CPSF7Q8N684 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPSF7Q8N684 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms