Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf42Q8N5U0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
C11orf42Q8N5U0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.33■□□□□ 0.2
C11orf42Q8N5U0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
C11orf42Q8N5U0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf42Q8N5U0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
C11orf42Q8N5U0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.33■□□□□ 0.2
C11orf42Q8N5U0 AC112907.3-201ENST00000577781 2400 ntBASIC16.33■□□□□ 0.2
C11orf42Q8N5U0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 RPS2P52-201ENST00000469610 820 ntBASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf42Q8N5U0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 ABHD17AP1-201ENST00000358206 933 ntBASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf42Q8N5U0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 TCF3P1-201ENST00000423021 1937 ntBASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf42Q8N5U0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 AC233263.1-201ENST00000578059 224 ntBASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 AC006058.3-201ENST00000606217 1069 ntBASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C11orf42Q8N5U0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms