Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP001271.2-201ENST00000624018 1556 ntBASIC18.6■□□□□ 0.57
COL27A1Q8IZC6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 SMG8-203ENST00000578922 2178 ntBASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 FAM86EP-206ENST00000510506 987 ntBASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.59■□□□□ 0.57
COL27A1Q8IZC6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 AP003041.3-201ENST00000527151 707 ntBASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 AC130371.2-201ENST00000619443 611 ntBASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL27A1Q8IZC6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 RNF152P1-201ENST00000397754 604 ntBASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 CA15P1-201ENST00000481698 905 ntBASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 AL441883.1-201ENST00000566170 1045 ntBASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL27A1Q8IZC6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 SLC25A1P2-201ENST00000430693 912 ntBASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 AC009947.2-201ENST00000444014 672 ntBASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 TSPY17P-201ENST00000450329 467 ntBASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 COX11P1-201ENST00000489116 835 ntBASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 AL121894.2-201ENST00000602977 491 ntBASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 AC116562.4-202ENST00000641738 218 ntBASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.57■□□□□ 0.56
COL27A1Q8IZC6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 KRT18P38-201ENST00000449496 1282 ntBASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 AL023973.1-201ENST00000624619 620 ntBASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL27A1Q8IZC6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms