Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 TMPOP1-202ENST00000424642 1267 ntBASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 MIR2861-201ENST00000636310 90 ntBASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 CD177P1-201ENST00000606252 935 ntBASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 AL135905.2-201ENST00000584934 1404 ntBASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC105Q8IYK2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 ARMC10P1-201ENST00000313754 855 ntBASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC105Q8IYK2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 AC133681.1-201ENST00000465482 601 ntBASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC105Q8IYK2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC105Q8IYK2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC105Q8IYK2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC105Q8IYK2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC105Q8IYK2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC105Q8IYK2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC105Q8IYK2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC105Q8IYK2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC105Q8IYK2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC105Q8IYK2 AC124016.1-201ENST00000609552 612 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms