Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 AP004607.4-201ENST00000530158 1459 ntBASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 MIR4466-201ENST00000606121 54 ntBASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD2Q8IV50 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LYSMD2Q8IV50 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
LYSMD2Q8IV50 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.21■□□□□ 0.34
LYSMD2Q8IV50 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.21■□□□□ 0.34
LYSMD2Q8IV50 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.21■□□□□ 0.34
LYSMD2Q8IV50 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 AC009237.14-201ENST00000609975 1594 ntBASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD2Q8IV50 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 BX842568.3-201ENST00000418104 571 ntBASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD2Q8IV50 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms