Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 AL671277.2-201ENST00000458060 996 ntBASIC20.3■□□□□ 0.84
DENND4AQ7Z401 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DENND4AQ7Z401 AC006128.1-201ENST00000624704 1661 ntBASIC20.3■□□□□ 0.84
DENND4AQ7Z401 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 CA15P1-201ENST00000481698 905 ntBASIC20.29■□□□□ 0.84
DENND4AQ7Z401 AL023803.3-201ENST00000615559 522 ntBASIC20.29■□□□□ 0.84
DENND4AQ7Z401 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 AL023973.1-201ENST00000624619 620 ntBASIC20.29■□□□□ 0.84
DENND4AQ7Z401 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 KRT8P8-201ENST00000434750 1448 ntBASIC20.29■□□□□ 0.84
DENND4AQ7Z401 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
DENND4AQ7Z401 TMEM179-206ENST00000616017 1645 ntBASIC20.29■□□□□ 0.84
DENND4AQ7Z401 AC092338.2-201ENST00000568827 1415 ntBASIC20.28■□□□□ 0.84
DENND4AQ7Z401 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 AC008040.2-201ENST00000461049 708 ntBASIC20.28■□□□□ 0.84
DENND4AQ7Z401 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 AL441883.1-201ENST00000566170 1045 ntBASIC20.28■□□□□ 0.84
DENND4AQ7Z401 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 KRT16P6-202ENST00000425692 1426 ntBASIC20.28■□□□□ 0.84
DENND4AQ7Z401 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 KRT126P-201ENST00000549467 1181 ntBASIC20.28■□□□□ 0.84
DENND4AQ7Z401 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DENND4AQ7Z401 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 IER3-202ENST00000376377 1350 ntBASIC20.27■□□□□ 0.84
DENND4AQ7Z401 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
DENND4AQ7Z401 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
DENND4AQ7Z401 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DENND4AQ7Z401 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
DENND4AQ7Z401 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.27■□□□□ 0.83
DENND4AQ7Z401 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DENND4AQ7Z401 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 AL450487.1-201ENST00000426799 995 ntBASIC20.26■□□□□ 0.83
DENND4AQ7Z401 KRT18P38-201ENST00000449496 1282 ntBASIC20.26■□□□□ 0.83
DENND4AQ7Z401 AP003041.3-201ENST00000527151 707 ntBASIC20.26■□□□□ 0.83
DENND4AQ7Z401 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 AC130371.2-201ENST00000619443 611 ntBASIC20.26■□□□□ 0.83
DENND4AQ7Z401 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 CLDN5-201ENST00000403084 2357 ntBASIC20.26■□□□□ 0.83
DENND4AQ7Z401 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 PLK5-205ENST00000642079 1969 ntBASIC20.26■□□□□ 0.83
DENND4AQ7Z401 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 AC112907.2-201ENST00000448639 330 ntBASIC20.26■□□□□ 0.83
DENND4AQ7Z401 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
DENND4AQ7Z401 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.25■□□□□ 0.83
DENND4AQ7Z401 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms