Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS13CQ709C8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VPS13CQ709C8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS13CQ709C8 MIR2861-201ENST00000636310 90 ntBASIC16.43■□□□□ 0.22
VPS13CQ709C8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
VPS13CQ709C8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
VPS13CQ709C8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 TSPY21P-201ENST00000433481 731 ntBASIC16.43■□□□□ 0.22
VPS13CQ709C8 TSPY23P-201ENST00000440136 739 ntBASIC16.43■□□□□ 0.22
VPS13CQ709C8 CCR12P-201ENST00000446203 998 ntBASIC16.43■□□□□ 0.22
VPS13CQ709C8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 KRT18P16-201ENST00000510337 1294 ntBASIC16.43■□□□□ 0.22
VPS13CQ709C8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS13CQ709C8 SMG8-203ENST00000578922 2178 ntBASIC16.43■□□□□ 0.22
VPS13CQ709C8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VPS13CQ709C8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.43■□□□□ 0.22
VPS13CQ709C8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 AC128688.1-201ENST00000487626 519 ntBASIC16.43■□□□□ 0.22
VPS13CQ709C8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13CQ709C8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 MFAP1P1-201ENST00000442257 1255 ntBASIC16.42■□□□□ 0.22
VPS13CQ709C8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS13CQ709C8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VPS13CQ709C8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS13CQ709C8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
VPS13CQ709C8 AP006587.1-201ENST00000534129 1502 ntBASIC16.42■□□□□ 0.22
VPS13CQ709C8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 RCC2P6-201ENST00000526625 1557 ntBASIC16.42■□□□□ 0.22
VPS13CQ709C8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13CQ709C8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS13CQ709C8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.42■□□□□ 0.22
VPS13CQ709C8 FP700111.2-201ENST00000619190 1892 ntBASIC16.42■□□□□ 0.22
VPS13CQ709C8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VPS13CQ709C8 AC092667.1-201ENST00000434301 2586 ntBASIC16.42■□□□□ 0.22
VPS13CQ709C8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
VPS13CQ709C8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
VPS13CQ709C8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
VPS13CQ709C8 TFP1-202ENST00000475455 1573 ntBASIC16.41■□□□□ 0.22
VPS13CQ709C8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS13CQ709C8 GPALPP1-207ENST00000611650 899 ntBASIC16.41■□□□□ 0.22
VPS13CQ709C8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 HYMAI.1-201ENST00000620949 238 ntBASIC16.41■□□□□ 0.22
VPS13CQ709C8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS13CQ709C8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 AC092647.4-201ENST00000457211 535 ntBASIC16.41■□□□□ 0.22
VPS13CQ709C8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS13CQ709C8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.41■□□□□ 0.22
VPS13CQ709C8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
VPS13CQ709C8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS13CQ709C8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 C1QL1P1-201ENST00000568105 661 ntBASIC16.4■□□□□ 0.22
VPS13CQ709C8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13CQ709C8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VPS13CQ709C8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms