Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 ECEL1P2-202ENST00000465689 757 ntBASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 AC097488.1-201ENST00000507834 756 ntBASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC149Q6ZUS6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC149Q6ZUS6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC149Q6ZUS6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC149Q6ZUS6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC149Q6ZUS6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC149Q6ZUS6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CCDC149Q6ZUS6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC149Q6ZUS6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 LINC01238-205ENST00000567549 1107 ntBASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC149Q6ZUS6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 SMG8-203ENST00000578922 2178 ntBASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 CRYGFP-201ENST00000418459 633 ntBASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC149Q6ZUS6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CCDC149Q6ZUS6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC149Q6ZUS6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC149Q6ZUS6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC149Q6ZUS6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC149Q6ZUS6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC149Q6ZUS6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC149Q6ZUS6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC149Q6ZUS6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC149Q6ZUS6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms