Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 AICDA-202ENST00000537228 667 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 PTMA-205ENST00000410064 814 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 TRIR-202ENST00000588213 841 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 AP001271.2-201ENST00000624018 1556 ntBASIC12.43□□□□□ -0.42
LINC00575Q6W349 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00575Q6W349 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00575Q6W349 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 AC006333.2-201ENST00000607957 2099 ntBASIC12.42□□□□□ -0.42
LINC00575Q6W349 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 AC233992.3-201ENST00000607491 485 ntBASIC12.42□□□□□ -0.42
LINC00575Q6W349 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00575Q6W349 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00575Q6W349 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms