Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SHC4Q6S5L8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SHC4Q6S5L8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SHC4Q6S5L8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.16■■□□□ 1.14
SHC4Q6S5L8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.16■■□□□ 1.14
SHC4Q6S5L8 AL138781.1-201ENST00000566567 1274 ntBASIC22.16■■□□□ 1.14
SHC4Q6S5L8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SHC4Q6S5L8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.16■■□□□ 1.14
SHC4Q6S5L8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.15■■□□□ 1.14
SHC4Q6S5L8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SHC4Q6S5L8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SHC4Q6S5L8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SHC4Q6S5L8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
SHC4Q6S5L8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
SHC4Q6S5L8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 RPS2P52-201ENST00000469610 820 ntBASIC22.14■■□□□ 1.13
SHC4Q6S5L8 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.14■■□□□ 1.13
SHC4Q6S5L8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 MIR4758-201ENST00000577688 71 ntBASIC22.14■■□□□ 1.13
SHC4Q6S5L8 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.14■■□□□ 1.13
SHC4Q6S5L8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHC4Q6S5L8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 RNF165-205ENST00000588679 2904 ntBASIC22.13■■□□□ 1.13
SHC4Q6S5L8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 AC083880.1-201ENST00000608266 535 ntBASIC22.13■■□□□ 1.13
SHC4Q6S5L8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHC4Q6S5L8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 HLA-B-256ENST00000639848 1089 ntBASIC22.12■■□□□ 1.13
SHC4Q6S5L8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 AC092368.3-202ENST00000574180 1591 ntBASIC22.12■■□□□ 1.13
SHC4Q6S5L8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SHC4Q6S5L8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHC4Q6S5L8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHC4Q6S5L8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHC4Q6S5L8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHC4Q6S5L8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SHC4Q6S5L8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHC4Q6S5L8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.11■■□□□ 1.13
SHC4Q6S5L8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHC4Q6S5L8 AC097658.1-201ENST00000475555 843 ntBASIC22.11■■□□□ 1.13
SHC4Q6S5L8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms