Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 AC084018.2-201ENST00000613093 2607 ntBASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 FP325331.1-202ENST00000623531 1380 ntBASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 SYT6-210ENST00000641643 1587 ntBASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88Q6PEY1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 AC135279.3-201ENST00000610945 1311 ntBASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 PCDHA12-202ENST00000613593 2588 ntBASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88Q6PEY1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 AC106739.1-201ENST00000617035 715 ntBASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 AC241377.3-202ENST00000626088 1088 ntBASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 AC241585.3-202ENST00000628937 1088 ntBASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 AC245100.8-202ENST00000629247 1058 ntBASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 AL354751.1-201ENST00000412768 1863 ntBASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88Q6PEY1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88Q6PEY1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms