Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 TUBB8P6-201ENST00000436895 1288 ntBASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 AC116562.2-201ENST00000507042 360 ntBASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 KRT16P1-201ENST00000399124 1418 ntBASIC18.15■□□□□ 0.5
H3F3CQ6NXT2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
H3F3CQ6NXT2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
H3F3CQ6NXT2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 ECEL1P3-201ENST00000427961 737 ntBASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 LINC01023-201ENST00000606054 436 ntBASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 REXO1L10P-201ENST00000615707 1290 ntBASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 AL445675.2-201ENST00000620291 557 ntBASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 CR392000.1-201ENST00000624770 1228 ntBASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 AP005212.1-201ENST00000581547 1997 ntBASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 AC073314.1-201ENST00000568729 2216 ntBASIC18.13■□□□□ 0.49
H3F3CQ6NXT2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 AC087499.1-201ENST00000418141 1075 ntBASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.12■□□□□ 0.49
H3F3CQ6NXT2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.11■□□□□ 0.49
H3F3CQ6NXT2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms