Protein–RNA interactions for Protein: Q6F5E8

CARMIL2, Capping protein, Arp2/3 and myosin-I linker protein 2, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL2Q6F5E8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CARMIL2Q6F5E8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 KRT8P45-201ENST00000414328 1447 ntBASIC31.17■■■□□ 2.58
CARMIL2Q6F5E8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 CKBP1-201ENST00000565489 1086 ntBASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 HYMAI.1-201ENST00000620949 238 ntBASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
CARMIL2Q6F5E8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 FXN-203ENST00000396366 922 ntTSL 2 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 AL160286.2-201ENST00000567150 934 ntBASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 NEK4P2-201ENST00000580004 1012 ntBASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC31.15■■■□□ 2.58
CARMIL2Q6F5E8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
CARMIL2Q6F5E8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CARMIL2Q6F5E8 STARP1-201ENST00000397973 869 ntBASIC31.14■■■□□ 2.58
CARMIL2Q6F5E8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC31.14■■■□□ 2.58
CARMIL2Q6F5E8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC31.13■■■□□ 2.57
CARMIL2Q6F5E8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CARMIL2Q6F5E8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC31.12■■■□□ 2.57
CARMIL2Q6F5E8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CARMIL2Q6F5E8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CARMIL2Q6F5E8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CARMIL2Q6F5E8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CARMIL2Q6F5E8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 NPAP1P7-201ENST00000613027 823 ntBASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC31.11■■■□□ 2.57
CARMIL2Q6F5E8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 FP700111.2-201ENST00000619190 1892 ntBASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 NME1-207ENST00000480143 964 ntTSL 2 BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CARMIL2Q6F5E8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms