Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39BQ5VTQ0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 BX119927.1-201ENST00000636596 1552 ntBASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 AL158047.1-201ENST00000445918 881 ntBASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 FAM197Y4-202ENST00000622692 608 ntBASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TTC39BQ5VTQ0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 UBE2SP1-201ENST00000450587 669 ntBASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 AC124016.1-201ENST00000609552 612 ntBASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.43■□□□□ 0.86
TTC39BQ5VTQ0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 AL023875.1-201ENST00000640777 796 ntBASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39BQ5VTQ0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 AP006294.2-201ENST00000641667 209 ntBASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 AC116351.2-201ENST00000606540 1585 ntBASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.41■□□□□ 0.86
TTC39BQ5VTQ0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms