Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC079834.2-201ENST00000609776 1949 ntBASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 AC130371.2-201ENST00000619443 611 ntBASIC29.88■■■□□ 2.37
CDC42BPAQ5VT25 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 GPX4-207ENST00000589115 812 ntTSL 2 BASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 AP000550.4-202ENST00000639755 178 ntBASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 KRT8P41-201ENST00000533985 1514 ntBASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC29.87■■■□□ 2.37
CDC42BPAQ5VT25 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 AC116407.4-201ENST00000623319 1061 ntBASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC29.86■■■□□ 2.37
CDC42BPAQ5VT25 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 COPE-203ENST00000351079 907 ntTSL 2 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 BET1L-202ENST00000332865 533 ntTSL 5 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 RNF152P1-201ENST00000397754 604 ntBASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 CA15P1-201ENST00000481698 905 ntBASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 COX11P1-201ENST00000489116 835 ntBASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 TOLLIP-AS1-201ENST00000530897 939 ntBASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC29.85■■■□□ 2.37
CDC42BPAQ5VT25 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 DUSP5P1-201ENST00000441325 1139 ntBASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 TSPY17P-201ENST00000450329 467 ntBASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 AP003041.3-201ENST00000527151 707 ntBASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDC42BPAQ5VT25 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPAQ5VT25 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
CDC42BPAQ5VT25 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPAQ5VT25 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
CDC42BPAQ5VT25 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPAQ5VT25 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC29.83■■■□□ 2.37
CDC42BPAQ5VT25 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC29.83■■■□□ 2.37
CDC42BPAQ5VT25 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC29.83■■■□□ 2.37
CDC42BPAQ5VT25 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDC42BPAQ5VT25 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 BX664615.1-201ENST00000443558 458 ntBASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 WDR88-203ENST00000592765 651 ntTSL 5 BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 AC009947.2-201ENST00000444014 672 ntBASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 CD320-202ENST00000537716 1119 ntTSL 2 BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 AC005332.1-201ENST00000577698 1310 ntBASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDC42BPAQ5VT25 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms