Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC32.28■■■□□ 2.76
SNAPC4Q5SXM2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SNAPC4Q5SXM2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
SNAPC4Q5SXM2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC32.27■■■□□ 2.76
SNAPC4Q5SXM2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SNAPC4Q5SXM2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SNAPC4Q5SXM2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC32.27■■■□□ 2.76
SNAPC4Q5SXM2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
SNAPC4Q5SXM2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SNAPC4Q5SXM2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC32.26■■■□□ 2.76
SNAPC4Q5SXM2 AC004870.1-201ENST00000315132 882 ntBASIC32.26■■■□□ 2.75
SNAPC4Q5SXM2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
SNAPC4Q5SXM2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC32.26■■■□□ 2.75
SNAPC4Q5SXM2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 AL845331.1-201ENST00000424978 1190 ntBASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 UNC93B7-201ENST00000509439 705 ntBASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
SNAPC4Q5SXM2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 AP000523.1-201ENST00000398242 1049 ntBASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 MIR3652-201ENST00000579335 131 ntBASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SNAPC4Q5SXM2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC32.23■■■□□ 2.75
SNAPC4Q5SXM2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC32.23■■■□□ 2.75
SNAPC4Q5SXM2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SNAPC4Q5SXM2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SNAPC4Q5SXM2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
SNAPC4Q5SXM2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SNAPC4Q5SXM2 GCSHP2-201ENST00000560971 527 ntBASIC32.23■■■□□ 2.75
SNAPC4Q5SXM2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC32.22■■■□□ 2.75
SNAPC4Q5SXM2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
SNAPC4Q5SXM2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SNAPC4Q5SXM2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC32.22■■■□□ 2.75
SNAPC4Q5SXM2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SNAPC4Q5SXM2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC32.22■■■□□ 2.75
SNAPC4Q5SXM2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC32.22■■■□□ 2.75
SNAPC4Q5SXM2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
SNAPC4Q5SXM2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
SNAPC4Q5SXM2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 AC005229.4-201ENST00000610085 2198 ntBASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 NEK4P2-201ENST00000580004 1012 ntBASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SNAPC4Q5SXM2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 FAAHP1-202ENST00000446499 1238 ntBASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC32.2■■■□□ 2.75
SNAPC4Q5SXM2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC32.2■■■□□ 2.74
SNAPC4Q5SXM2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC32.2■■■□□ 2.74
SNAPC4Q5SXM2 PHGDH-210ENST00000641115 1638 ntBASIC32.2■■■□□ 2.74
SNAPC4Q5SXM2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 AL645929.1-201ENST00000420084 975 ntBASIC32.19■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms