Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 AC008040.2-201ENST00000461049 708 ntBASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 AC092865.7-201ENST00000641832 219 ntBASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNFT1Q5M7Z0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 AL391422.3-201ENST00000603791 2761 ntBASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 AP005212.1-201ENST00000581547 1997 ntBASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 AC130371.2-201ENST00000619443 611 ntBASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 KRT18P22-201ENST00000402024 1347 ntBASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNFT1Q5M7Z0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 RCC2P6-201ENST00000526625 1557 ntBASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 AC113347.1-201ENST00000413321 391 ntBASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 CRYGFP-201ENST00000418459 633 ntBASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 KRT18P57-201ENST00000443599 1254 ntBASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 AC097488.1-201ENST00000507834 756 ntBASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNFT1Q5M7Z0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNFT1Q5M7Z0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNFT1Q5M7Z0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNFT1Q5M7Z0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNFT1Q5M7Z0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms