Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM35AQ53FP2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM35AQ53FP2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 AC069544.1-201ENST00000609399 999 ntBASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM35AQ53FP2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35AQ53FP2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 AL158211.5-201ENST00000623583 2518 ntBASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35AQ53FP2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
TMEM35AQ53FP2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.58
TMEM35AQ53FP2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM35AQ53FP2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 KRT18P16-201ENST00000510337 1294 ntBASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 MTDHP1-201ENST00000605323 784 ntBASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms