Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD4Q53EL6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD4Q53EL6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 C2orf69P4-201ENST00000565394 541 ntBASIC18.82■□□□□ 0.6
PDCD4Q53EL6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 AC069236.1-201ENST00000604339 616 ntBASIC18.82■□□□□ 0.6
PDCD4Q53EL6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.82■□□□□ 0.6
PDCD4Q53EL6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 AL355472.2-201ENST00000422958 438 ntBASIC18.81■□□□□ 0.6
PDCD4Q53EL6 CYP2T1P-201ENST00000432607 1285 ntBASIC18.81■□□□□ 0.6
PDCD4Q53EL6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 AL589743.5-201ENST00000616611 1050 ntBASIC18.81■□□□□ 0.6
PDCD4Q53EL6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDCD4Q53EL6 AC020916.1-201ENST00000587762 1774 ntBASIC18.81■□□□□ 0.6
PDCD4Q53EL6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDCD4Q53EL6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms