Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PTPN20Q4JDL3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 YBX1P10-201ENST00000444752 975 ntBASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN20Q4JDL3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 POU5F1P3-201ENST00000428824 1078 ntBASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 AC006058.3-201ENST00000606217 1069 ntBASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 AC073648.6-201ENST00000641589 218 ntBASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN20Q4JDL3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 AC116562.4-201ENST00000641316 2276 ntBASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN20Q4JDL3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.64■□□□□ 0.9
PTPN20Q4JDL3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN20Q4JDL3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
PTPN20Q4JDL3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN20Q4JDL3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN20Q4JDL3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN20Q4JDL3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN20Q4JDL3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.64■□□□□ 0.9
PTPN20Q4JDL3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PTPN20Q4JDL3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN20Q4JDL3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN20Q4JDL3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms