Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 AL355472.2-201ENST00000422958 438 ntBASIC17.34■□□□□ 0.37
ODF4Q2M2E3 KRT8P20-201ENST00000423953 1409 ntBASIC17.34■□□□□ 0.37
ODF4Q2M2E3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 AL162412.1-201ENST00000567129 965 ntBASIC17.34■□□□□ 0.37
ODF4Q2M2E3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 AC009237.14-201ENST00000609975 1594 ntBASIC17.34■□□□□ 0.37
ODF4Q2M2E3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ODF4Q2M2E3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.33■□□□□ 0.37
ODF4Q2M2E3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ODF4Q2M2E3 AC068338.2-201ENST00000563278 1430 ntBASIC17.33■□□□□ 0.36
ODF4Q2M2E3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 AL031963.3-201ENST00000606441 850 ntBASIC17.33■□□□□ 0.36
ODF4Q2M2E3 AC105020.6-201ENST00000621523 1217 ntBASIC17.33■□□□□ 0.36
ODF4Q2M2E3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 HTR7P1-202ENST00000624664 4411 ntBASIC17.33■□□□□ 0.36
ODF4Q2M2E3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ODF4Q2M2E3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 KRT18P68-201ENST00000392293 1000 ntBASIC17.32■□□□□ 0.36
ODF4Q2M2E3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 KRT18P5-201ENST00000436075 1291 ntBASIC17.32■□□□□ 0.36
ODF4Q2M2E3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ODF4Q2M2E3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF4Q2M2E3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms