Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 YBX1P10-201ENST00000444752 975 ntBASIC17.34■□□□□ 0.37
HIST3H3Q16695 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.34■□□□□ 0.37
HIST3H3Q16695 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 AP006587.1-201ENST00000534129 1502 ntBASIC17.34■□□□□ 0.37
HIST3H3Q16695 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HIST3H3Q16695 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST3H3Q16695 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.33■□□□□ 0.37
HIST3H3Q16695 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST3H3Q16695 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.33■□□□□ 0.37
HIST3H3Q16695 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST3H3Q16695 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
HIST3H3Q16695 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HIST3H3Q16695 AC026366.1-201ENST00000488803 879 ntBASIC17.33■□□□□ 0.36
HIST3H3Q16695 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 AP003097.1-201ENST00000530657 1135 ntBASIC17.33■□□□□ 0.36
HIST3H3Q16695 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HIST3H3Q16695 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST3H3Q16695 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HIST3H3Q16695 AC093484.2-201ENST00000580996 2166 ntBASIC17.33■□□□□ 0.36
HIST3H3Q16695 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HIST3H3Q16695 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST3H3Q16695 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST3H3Q16695 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HIST3H3Q16695 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 AC116562.4-201ENST00000641316 2276 ntBASIC17.31■□□□□ 0.36
HIST3H3Q16695 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H3Q16695 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H3Q16695 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H3Q16695 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H3Q16695 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H3Q16695 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H3Q16695 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H3Q16695 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H3Q16695 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST3H3Q16695 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
HIST3H3Q16695 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms