Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
CACNA1EQ15878 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.18■□□□□ 0.66
CACNA1EQ15878 AC092338.2-201ENST00000568827 1415 ntBASIC19.18■□□□□ 0.66
CACNA1EQ15878 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 TSPY5P-201ENST00000426936 936 ntBASIC19.17■□□□□ 0.66
CACNA1EQ15878 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 CA15P1-201ENST00000481698 905 ntBASIC19.17■□□□□ 0.66
CACNA1EQ15878 COX11P1-201ENST00000489116 835 ntBASIC19.17■□□□□ 0.66
CACNA1EQ15878 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CACNA1EQ15878 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CACNA1EQ15878 AC083849.1-201ENST00000615227 514 ntBASIC19.17■□□□□ 0.66
CACNA1EQ15878 AC026310.3-201ENST00000625186 2373 ntBASIC19.17■□□□□ 0.66
CACNA1EQ15878 AC007225.1-201ENST00000566331 1836 ntBASIC19.16■□□□□ 0.66
CACNA1EQ15878 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 KRT8P8-201ENST00000434750 1448 ntBASIC19.16■□□□□ 0.66
CACNA1EQ15878 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 SLC25A1P2-201ENST00000430693 912 ntBASIC19.16■□□□□ 0.66
CACNA1EQ15878 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CACNA1EQ15878 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.16■□□□□ 0.66
CACNA1EQ15878 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CACNA1EQ15878 AC012676.1-201ENST00000574705 1949 ntBASIC19.15■□□□□ 0.66
CACNA1EQ15878 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
CACNA1EQ15878 AC005332.1-201ENST00000577698 1310 ntBASIC19.15■□□□□ 0.66
CACNA1EQ15878 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CACNA1EQ15878 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.15■□□□□ 0.66
CACNA1EQ15878 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.15■□□□□ 0.66
CACNA1EQ15878 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.15■□□□□ 0.66
CACNA1EQ15878 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.15■□□□□ 0.66
CACNA1EQ15878 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CACNA1EQ15878 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CACNA1EQ15878 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.15■□□□□ 0.66
CACNA1EQ15878 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CACNA1EQ15878 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CACNA1EQ15878 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CACNA1EQ15878 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CACNA1EQ15878 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.14■□□□□ 0.66
CACNA1EQ15878 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.14■□□□□ 0.66
CACNA1EQ15878 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CACNA1EQ15878 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1EQ15878 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1EQ15878 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CACNA1EQ15878 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CACNA1EQ15878 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1EQ15878 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1EQ15878 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CACNA1EQ15878 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.14■□□□□ 0.65
CACNA1EQ15878 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1EQ15878 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.14■□□□□ 0.65
CACNA1EQ15878 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1EQ15878 AC092647.4-201ENST00000457211 535 ntBASIC19.14■□□□□ 0.65
CACNA1EQ15878 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.14■□□□□ 0.65
CACNA1EQ15878 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms