Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-1P78426 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX6-1P78426 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NKX6-1P78426 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NKX6-1P78426 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NKX6-1P78426 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-1P78426 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX6-1P78426 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
NKX6-1P78426 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.27■□□□□ 0.36
NKX6-1P78426 RARRES2P10-201ENST00000564312 460 ntBASIC17.27■□□□□ 0.36
NKX6-1P78426 AC012306.2-201ENST00000609350 630 ntBASIC17.27■□□□□ 0.36
NKX6-1P78426 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NKX6-1P78426 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NKX6-1P78426 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.27■□□□□ 0.35
NKX6-1P78426 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NKX6-1P78426 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NKX6-1P78426 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.27■□□□□ 0.35
NKX6-1P78426 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NKX6-1P78426 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NKX6-1P78426 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.26■□□□□ 0.35
NKX6-1P78426 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NKX6-1P78426 TMPOP1-202ENST00000424642 1267 ntBASIC17.26■□□□□ 0.35
NKX6-1P78426 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NKX6-1P78426 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.26■□□□□ 0.35
NKX6-1P78426 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.26■□□□□ 0.35
NKX6-1P78426 AL445228.2-201ENST00000605589 952 ntBASIC17.26■□□□□ 0.35
NKX6-1P78426 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NKX6-1P78426 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
NKX6-1P78426 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX6-1P78426 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX6-1P78426 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
NKX6-1P78426 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.25■□□□□ 0.35
NKX6-1P78426 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-1P78426 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-1P78426 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.25■□□□□ 0.35
NKX6-1P78426 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-1P78426 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-1P78426 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-1P78426 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NKX6-1P78426 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.25■□□□□ 0.35
NKX6-1P78426 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX6-1P78426 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-1P78426 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.25■□□□□ 0.35
NKX6-1P78426 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX6-1P78426 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NKX6-1P78426 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NKX6-1P78426 CD177P1-201ENST00000606252 935 ntBASIC17.25■□□□□ 0.35
NKX6-1P78426 AL031963.3-201ENST00000606441 850 ntBASIC17.25■□□□□ 0.35
NKX6-1P78426 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NKX6-1P78426 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-1P78426 DPP3P2-201ENST00000416030 1696 ntBASIC17.25■□□□□ 0.35
NKX6-1P78426 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX6-1P78426 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NKX6-1P78426 KRT8P20-201ENST00000423953 1409 ntBASIC17.24■□□□□ 0.35
NKX6-1P78426 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.24■□□□□ 0.35
NKX6-1P78426 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 HLA-G-202ENST00000376815 851 ntBASIC17.24■□□□□ 0.35
NKX6-1P78426 HLA-G-203ENST00000376818 1127 ntBASIC17.24■□□□□ 0.35
NKX6-1P78426 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.24■□□□□ 0.35
NKX6-1P78426 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.24■□□□□ 0.35
NKX6-1P78426 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.24■□□□□ 0.35
NKX6-1P78426 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.24■□□□□ 0.35
NKX6-1P78426 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-1P78426 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.24■□□□□ 0.35
NKX6-1P78426 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms