Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YBX1P67809 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
YBX1P67809 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
YBX1P67809 AC093484.2-201ENST00000580996 2166 ntBASIC19.15■□□□□ 0.66
YBX1P67809 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
YBX1P67809 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
YBX1P67809 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YBX1P67809 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.15■□□□□ 0.66
YBX1P67809 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YBX1P67809 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.15■□□□□ 0.66
YBX1P67809 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
YBX1P67809 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YBX1P67809 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
YBX1P67809 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.15■□□□□ 0.66
YBX1P67809 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
YBX1P67809 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
YBX1P67809 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YBX1P67809 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.14■□□□□ 0.65
YBX1P67809 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.14■□□□□ 0.65
YBX1P67809 AC005332.7-201ENST00000614046 2005 ntBASIC19.14■□□□□ 0.65
YBX1P67809 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YBX1P67809 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.14■□□□□ 0.65
YBX1P67809 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
YBX1P67809 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
YBX1P67809 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YBX1P67809 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.14■□□□□ 0.65
YBX1P67809 POM121L13P-201ENST00000422362 380 ntBASIC19.14■□□□□ 0.65
YBX1P67809 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.14■□□□□ 0.65
YBX1P67809 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.14■□□□□ 0.65
YBX1P67809 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.14■□□□□ 0.65
YBX1P67809 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.14■□□□□ 0.65
YBX1P67809 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
YBX1P67809 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.14■□□□□ 0.65
YBX1P67809 AC073648.6-201ENST00000641589 218 ntBASIC19.14■□□□□ 0.65
YBX1P67809 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.14■□□□□ 0.65
YBX1P67809 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
YBX1P67809 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.14■□□□□ 0.65
YBX1P67809 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
YBX1P67809 TREX1-205ENST00000625293 1783 ntBASIC19.14■□□□□ 0.65
YBX1P67809 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YBX1P67809 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.13■□□□□ 0.65
YBX1P67809 AC004408.2-201ENST00000623613 2777 ntBASIC19.13■□□□□ 0.65
YBX1P67809 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 AC128676.1-201ENST00000454392 318 ntBASIC19.13■□□□□ 0.65
YBX1P67809 FAM201B-201ENST00000458407 597 ntBASIC19.13■□□□□ 0.65
YBX1P67809 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 KRT16P6-202ENST00000425692 1426 ntBASIC19.13■□□□□ 0.65
YBX1P67809 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.13■□□□□ 0.65
YBX1P67809 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.13■□□□□ 0.65
YBX1P67809 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.13■□□□□ 0.65
YBX1P67809 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.13■□□□□ 0.65
YBX1P67809 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
YBX1P67809 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.13■□□□□ 0.65
YBX1P67809 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
YBX1P67809 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
YBX1P67809 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YBX1P67809 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
YBX1P67809 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.12■□□□□ 0.65
YBX1P67809 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.12■□□□□ 0.65
YBX1P67809 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.12■□□□□ 0.65
YBX1P67809 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.12■□□□□ 0.65
YBX1P67809 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.12■□□□□ 0.65
YBX1P67809 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
YBX1P67809 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.12■□□□□ 0.65
YBX1P67809 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.12■□□□□ 0.65
YBX1P67809 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
YBX1P67809 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YBX1P67809 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.11■□□□□ 0.65
YBX1P67809 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YBX1P67809 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.11■□□□□ 0.65
YBX1P67809 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YBX1P67809 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
YBX1P67809 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
YBX1P67809 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YBX1P67809 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms