Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.27■□□□□ 0.67
CLCNKAP51800 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCNKAP51800 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CLCNKAP51800 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCNKAP51800 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCNKAP51800 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCNKAP51800 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCNKAP51800 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLCNKAP51800 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCNKAP51800 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLCNKAP51800 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLCNKAP51800 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLCNKAP51800 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCNKAP51800 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 AF186192.3-201ENST00000583427 947 ntBASIC19.26■□□□□ 0.67
CLCNKAP51800 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCNKAP51800 AC113410.3-201ENST00000623366 203 ntBASIC19.26■□□□□ 0.67
CLCNKAP51800 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCNKAP51800 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CLCNKAP51800 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCNKAP51800 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKAP51800 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKAP51800 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCNKAP51800 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKAP51800 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCNKAP51800 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKAP51800 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLCNKAP51800 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKAP51800 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKAP51800 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKAP51800 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKAP51800 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCNKAP51800 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKAP51800 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCNKAP51800 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKAP51800 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKAP51800 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKAP51800 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCNKAP51800 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKAP51800 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCNKAP51800 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CLCNKAP51800 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCNKAP51800 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCNKAP51800 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCNKAP51800 TCF3P1-201ENST00000423021 1937 ntBASIC19.24■□□□□ 0.67
CLCNKAP51800 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLCNKAP51800 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.24■□□□□ 0.67
CLCNKAP51800 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLCNKAP51800 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCNKAP51800 AC073195.1-201ENST00000607241 877 ntBASIC19.24■□□□□ 0.67
CLCNKAP51800 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CLCNKAP51800 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCNKAP51800 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLCNKAP51800 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLCNKAP51800 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.24■□□□□ 0.67
CLCNKAP51800 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCNKAP51800 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CLCNKAP51800 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.23■□□□□ 0.67
CLCNKAP51800 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCNKAP51800 SNORA78-201ENST00000459373 127 ntBASIC19.23■□□□□ 0.67
CLCNKAP51800 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCNKAP51800 C1QL1P1-201ENST00000568105 661 ntBASIC19.23■□□□□ 0.67
CLCNKAP51800 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CLCNKAP51800 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 AC073130.3-201ENST00000624389 2278 ntBASIC19.23■□□□□ 0.67
CLCNKAP51800 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.23■□□□□ 0.67
CLCNKAP51800 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCNKAP51800 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCNKAP51800 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms