Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PDE6CP51160 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6CP51160 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6CP51160 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6CP51160 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6CP51160 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6CP51160 AL390719.1-204ENST00000412397 1219 ntBASIC21.19■□□□□ 0.98
PDE6CP51160 RPS2P52-201ENST00000469610 820 ntBASIC21.19■□□□□ 0.98
PDE6CP51160 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.19■□□□□ 0.98
PDE6CP51160 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6CP51160 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE6CP51160 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PDE6CP51160 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE6CP51160 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6CP51160 AL158211.5-201ENST00000623583 2518 ntBASIC21.19■□□□□ 0.98
PDE6CP51160 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PDE6CP51160 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE6CP51160 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE6CP51160 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
PDE6CP51160 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE6CP51160 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.18■□□□□ 0.98
PDE6CP51160 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PDE6CP51160 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.18■□□□□ 0.98
PDE6CP51160 POM121L13P-201ENST00000422362 380 ntBASIC21.18■□□□□ 0.98
PDE6CP51160 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.18■□□□□ 0.98
PDE6CP51160 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PDE6CP51160 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.18■□□□□ 0.98
PDE6CP51160 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.18■□□□□ 0.98
PDE6CP51160 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PDE6CP51160 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.18■□□□□ 0.98
PDE6CP51160 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6CP51160 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.17■□□□□ 0.98
PDE6CP51160 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.17■□□□□ 0.98
PDE6CP51160 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
PDE6CP51160 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 AC005829.2-201ENST00000571422 1056 ntBASIC21.17■□□□□ 0.98
PDE6CP51160 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.17■□□□□ 0.98
PDE6CP51160 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PDE6CP51160 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PDE6CP51160 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.17■□□□□ 0.98
PDE6CP51160 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.17■□□□□ 0.98
PDE6CP51160 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
PDE6CP51160 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDE6CP51160 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDE6CP51160 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.17■□□□□ 0.98
PDE6CP51160 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6CP51160 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6CP51160 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.16■□□□□ 0.98
PDE6CP51160 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6CP51160 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.16■□□□□ 0.98
PDE6CP51160 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6CP51160 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.16■□□□□ 0.98
PDE6CP51160 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.16■□□□□ 0.98
PDE6CP51160 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6CP51160 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6CP51160 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PDE6CP51160 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PDE6CP51160 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6CP51160 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.16■□□□□ 0.98
PDE6CP51160 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PDE6CP51160 UBE2SP1-201ENST00000450587 669 ntBASIC21.16■□□□□ 0.98
PDE6CP51160 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6CP51160 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PDE6CP51160 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6CP51160 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6CP51160 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.15■□□□□ 0.98
PDE6CP51160 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6CP51160 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6CP51160 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6CP51160 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6CP51160 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6CP51160 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.15■□□□□ 0.98
PDE6CP51160 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.15■□□□□ 0.98
PDE6CP51160 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.15■□□□□ 0.98
PDE6CP51160 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.15■□□□□ 0.98
PDE6CP51160 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.15■□□□□ 0.98
PDE6CP51160 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms