Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AK4P3-201ENST00000418260 669 ntBASIC21.82■■□□□ 1.08
CPT1AP50416 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.82■■□□□ 1.08
CPT1AP50416 LINC01238-205ENST00000567549 1107 ntBASIC21.82■■□□□ 1.08
CPT1AP50416 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.82■■□□□ 1.08
CPT1AP50416 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.82■■□□□ 1.08
CPT1AP50416 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.82■■□□□ 1.08
CPT1AP50416 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.82■■□□□ 1.08
CPT1AP50416 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CPT1AP50416 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CPT1AP50416 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 BX119927.1-201ENST00000636596 1552 ntBASIC21.82■■□□□ 1.08
CPT1AP50416 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPT1AP50416 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPT1AP50416 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPT1AP50416 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPT1AP50416 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPT1AP50416 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPT1AP50416 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CPT1AP50416 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPT1AP50416 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CPT1AP50416 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPT1AP50416 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.81■■□□□ 1.08
CPT1AP50416 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
CPT1AP50416 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CPT1AP50416 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.81■■□□□ 1.08
CPT1AP50416 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPT1AP50416 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPT1AP50416 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPT1AP50416 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPT1AP50416 AP001271.2-201ENST00000624018 1556 ntBASIC21.8■■□□□ 1.08
CPT1AP50416 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPT1AP50416 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPT1AP50416 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.8■■□□□ 1.08
CPT1AP50416 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPT1AP50416 AC091390.4-202ENST00000476426 537 ntBASIC21.8■■□□□ 1.08
CPT1AP50416 Z85996.1-201ENST00000494644 937 ntBASIC21.8■■□□□ 1.08
CPT1AP50416 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.8■■□□□ 1.08
CPT1AP50416 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CPT1AP50416 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPT1AP50416 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CPT1AP50416 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.8■■□□□ 1.08
CPT1AP50416 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.8■■□□□ 1.08
CPT1AP50416 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPT1AP50416 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPT1AP50416 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CPT1AP50416 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
CPT1AP50416 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CPT1AP50416 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPT1AP50416 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPT1AP50416 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPT1AP50416 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPT1AP50416 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.79■■□□□ 1.08
CPT1AP50416 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.79■■□□□ 1.08
CPT1AP50416 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CPT1AP50416 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.79■■□□□ 1.08
CPT1AP50416 AC010653.2-201ENST00000623505 997 ntBASIC21.79■■□□□ 1.08
CPT1AP50416 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.79■■□□□ 1.08
CPT1AP50416 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPT1AP50416 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.79■■□□□ 1.08
CPT1AP50416 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.79■■□□□ 1.08
CPT1AP50416 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.79■■□□□ 1.08
CPT1AP50416 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.79■■□□□ 1.08
CPT1AP50416 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CPT1AP50416 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPT1AP50416 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPT1AP50416 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPT1AP50416 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CPT1AP50416 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPT1AP50416 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPT1AP50416 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.78■■□□□ 1.08
CPT1AP50416 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.78■■□□□ 1.08
CPT1AP50416 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPT1AP50416 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.78■■□□□ 1.08
CPT1AP50416 AC022616.7-201ENST00000525383 220 ntBASIC21.78■■□□□ 1.08
CPT1AP50416 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.78■■□□□ 1.08
CPT1AP50416 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.78■■□□□ 1.08
CPT1AP50416 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CPT1AP50416 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CPT1AP50416 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPT1AP50416 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPT1AP50416 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPT1AP50416 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
CPT1AP50416 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CPT1AP50416 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPT1AP50416 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CPT1AP50416 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.77■■□□□ 1.08
CPT1AP50416 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.77■■□□□ 1.08
CPT1AP50416 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPT1AP50416 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.77■■□□□ 1.08
CPT1AP50416 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
CPT1AP50416 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.77■■□□□ 1.08
CPT1AP50416 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.77■■□□□ 1.08
CPT1AP50416 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.77■■□□□ 1.08
CPT1AP50416 AC063952.2-201ENST00000498792 1227 ntBASIC21.77■■□□□ 1.08
CPT1AP50416 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms